Genomic resources in potato and possibilities for exploitation

E. Ritter; F. Lucca; I. Sánchez; J.I. Ruiz de Galarreta; A. Aragonés; S. Castañón; G. Bryan; R. Waugh; V. Lefebvre; F. Rousselle-Bourgoise; C. Gebhardt; H. van Eck; H. van Os; J. Taco; E. Bakker; J. Bakker

Genomic resources in potato and possibilities for exploitation

In: Potato in progress

Authors:

E. Ritter

E. Ritter ¹NEIKER, Apartado 46, E-01080 Vitoria, España; eritter@neiker.net

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F. Lucca

F. Lucca ¹NEIKER, Apartado 46, E-01080 Vitoria, España; eritter@neiker.net

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I. Sánchez

I. Sánchez ¹NEIKER, Apartado 46, E-01080 Vitoria, España; eritter@neiker.net

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J.I. Ruiz de Galarreta

J.I. Ruiz de Galarreta ¹NEIKER, Apartado 46, E-01080 Vitoria, España; eritter@neiker.net

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A. Aragonés

A. Aragonés ¹NEIKER, Apartado 46, E-01080 Vitoria, España; eritter@neiker.net

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S. Castañón

S. Castañón ¹NEIKER, Apartado 46, E-01080 Vitoria, España; eritter@neiker.net

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G. Bryan

G. Bryan ²Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, United Kingdom

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R. Waugh

R. Waugh ²Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, United Kingdom

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V. Lefebvre

V. Lefebvre ³Institut National de la Recherche Agronomique (INRA), 84143 Monfavet Cedex, France

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F. Rousselle-Bourgoise

F. Rousselle-Bourgoise ³Institut National de la Recherche Agronomique (INRA), 84143 Monfavet Cedex, France

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C. Gebhardt

C. Gebhardt ⁴Max-Planck-Institut für Züchtungsforschung, Carl-von-Linné Weg 10, Cologne, Germany

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H. van Eck

H. van Eck ⁵Wageningen University, P.O. Box 386, 6700 AJ Wageningen, The Netherlands

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H. van Os

H. van Os ⁵Wageningen University, P.O. Box 386, 6700 AJ Wageningen, The Netherlands

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J. Taco

J. Taco ⁶Keygene N.V., P.O. Box 216, 6700 AE Wageningen, The Netherlands

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E. Bakker

E. Bakker ⁵Wageningen University, P.O. Box 386, 6700 AJ Wageningen, The Netherlands

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, and

J. Bakker

J. Bakker ⁵Wageningen University, P.O. Box 386, 6700 AJ Wageningen, The Netherlands

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Type:: Chapter

Pages:: 53–65

DOI:: https://doi.org/10.3920/978-90-8686-562-8_008

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This paper reviews the evolution of genomic R&D in potato and related wild species. In the 1980s and 1990s different molecular marker types were developed and applied in potato. Several genetic linkage maps were constructed and numerous markers for qualitative and quantitative characters were integrated in these maps, including applications at the tetraploid level. Comparative genome analyses within and between species revealed resistance gene clusters at several regions of the potato genome and certain common structures between related species. QTLs were found to correspond to genes of associated metabolic pathways (candidate genes). Molecular markers closely linked to qualitative traits or QTLs and candidate genes have been used to develop applications for marker assisted selection and breeding. A high density reference linkage map of 10000 markers was established in 2002 and an anchored physical and functional map is under construction. Novel tools for genome analysis and gene discovery are applied in potato, such as EST, cDNA-AFLP, microchip analyses and physical mapping. Several extended genomic resources are available on the WEB and recent R&D initiatives including genome sequencing indicate that potato is becoming a model crop species.

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Potato in progress

Science meets practice

E-Book ISBN:: 9789086865628

Publisher:: Wageningen Academic

Print Publication Date:: 30 Oct 2005

Subjects
- Life Sciences
  - General
  - Agriculture & Environment

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Genomic resources in potato and possibilities for exploitation

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Potato in progress

Science meets practice

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