Diversity metrics, species turnovers and nestedness of bird assemblages in a deep karst sinkhole
In: Israel Journal of Ecology and EvolutionServizio Aree protette, Città Metropolitana di Roma Capitale, via Tiburtina, 691, 00159 Rome, Italy;
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We reported a study on breeding birds occurring inside an 80 m-deep karst sinkhole, with the characterization of the assemblages recorded along its semi-vertical slopes from the upper edge until the bottom. The internal sides of the sinkhole have been vertically subdivided in four belts about 20 m high. The highest belt (at the upper edge of the cenote) showed the highest values in mean number of bird detections, mean and normalized species richness, and Shannon diversity index. The averaged values of number of detections and species richness significantly differ among belts. Species turnover (Cody’s β-diversity) was maximum between the highest belts. Whittaker plots showed a marked difference among assemblages shaping from broken-stick model to geometric series, and explicited a spatial progressive stress with a disruption in evenness towards the deepest belts. Bird assemblages evidenced a nested subset structure with deeper belts containing successive subsets of the species occurring in the upper belts. We hypothesize that, at least during the daytime in breeding season, the observed non-random distribution of species along the vertical stratification is likely due to (i) the progressive simplification both of the floristic composition and vegetation structure, and (ii) the paucity of sunlight as resources from the upper edge to the inner side of the cenote.
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-
Acevedo MA , Mitchell Aide T . 2008. Bird community dynamics and habitat associations in Karst, Mangrove and Pterocarpus forest fragments in an urban zone in Puerto Rico. Caribb J Sc. 44:402–416.
-
Almeida-Neto M , Guimaraes P , Guimaraes PR , Lodola RD , Ulrich W . 2008. A consistent metric for nestedness analysis in ecological systems: reconciling concept and measurement. Oikos 117:1227–1239.
-
Angulo B , Morales T , Uriarte JA , Antiguedad I . 2013. Implementing a comprehensive approach for evaluating significance and disturbance in protected karst areas to guide management strategies. J Environm Manag. 130:386–396.
-
Barr TC , Holsinger JR . 1985. Speciation in Cave Faunas. Ann Rev Ecol System. 16:313–337.
-
Bátori Z , Gallé R , Erdõs L , Körmöczi L . 2011. Ecological conditions, flora and vegetation of a large doline in the Mecsek Mountains (South Hungary). Acta Bot Croat. 70:147–155.
-
Bátori Z , Csiky J , Farkas T , Vojtkó AE , Erdõs L , Kovacs D , Wirth T , Kormoczi L , Tölgyesi C , Körmöczi L , Vojtkó A . 2014. A comparison of the vegetation of forested and non-forested solution dolines in Hungary: a preliminary study. Intern J Speleol. 43:15–26.
-
Battisti C , Dodaro G , Franco D . 2014. The data reliability in ecological research: a proposal for a quick self-assessment tool. Natur Hist Sc. 1:75–79.
-
Battisti C , Poeta G , Fanelli G . 2016. An introduction to Disturbance Ecology. A road map for wildlife management and conservation. Springer, The Netherland.
-
Bellamy PE , Hinsley SA , Newton I . 1996. Factors influencing bird species numbers in small woods in south-east England. J Appl Ecol. 33:249–262.
-
Bianconi R , Battisti C , Zapparoli M . 2004. Pattern of richness, abundance and diversity of four interior bird species in a hilly landscape in Central Italy: a contribution to assess their sensitivity to habitat fragmentation. J Medit Ecol. 3–4:37–44.
-
Bibby CJ , Burgess ND . 1992. Bird census techniques. London: Academic Press.
-
Bono P. 2001. Is the “Merro Well” the deepest karst cenote explored in the world? Environm Geol. 40:787–788.
-
Brichetti P , Fracasso G . 2015. Check-list degli uccelli italiani aggiornata al 2014. Riv Ital Ornit. 85:31–50.
-
Camprodon J , Brotons L . 2006. Effects of undergrowth clearing on the bird communities of the Northwestern Mediterranean Coppice Holm oak forests. Forest Ecol Manag. 221:72–82.
-
Cieslak M. 1985. Influence of forest size and other factors on breeding bird species number. Ekol Polska. 33:103–121.
-
Cody ML . 1975. Towards a theory of continental species diversity: bird distribution Mediterranean habitat gradients. In: Cody ML , Diamond JM , editors. Ecology and evolution of communities. Cambridge, Harvard University Press, pp. 214–257.
-
Cokendolpher JC , Polyak VJ . 1996. Biology of the Caves at Sinkhole Flat, Eddy County, New Mexico. J Cave Karst St. 58:181–192.
-
Culver DC . 2016. Karst environment. Zeitschrift Geomorphol. 60:103–117.
-
Culver DC , Master LL , Christmas MC , Hobbs HH . 2000. Obligate cave fauna of the 48 contiguous United States. Conserv Biol. 14:386–401.
-
Dabelsteen T , Larsen ON , Podorson SBJ . 1993. Habitat-induced degradation of sound signals: Quantifying the effects of communication sounds and bird location on blur ratio, excess attenuation, and signal-to-noise ratio in black bird song. Acoust Soc Amer J. 93:2206–2220.
-
Day M , Urich P . 2000. An assessment of protected karst landscapes in Southeast Asia. Cave Karst Sc. 27:61–70.
-
Dornelas M , Soykan CU , Ugland KI . 2011. Biodiversity and disturbance. In: Magurran A , McGill BJ , editors, Biological diversity. Frontiers in measurements and assessments. Oxford: University Press, Oxford, pp. 237–251.
-
Dytham C. 2011. Choosing and using statistics: a biologist’s guide. London: John Wiley and Sons.
-
Fracasso G , Baccetti N , Serra L . 2009. La lista CISO-COI degli Uccelli italiani. Parte prima: liste A, B e C. Avocetta. 33:5–24.
-
Freckleton RP , Watkinson AR , Green RE , Sutherland WJ . 2006. Census error and the detection of density dependence. J Anim Ecol. 75:837–851.
-
Friend S. 2002. Sinkholes. Pineapple Press Inc.
-
Gary MO , Sharp JM Jr , Caramanna G , Havens RH . 2003. Volcanically influenced speleogenesis: forming El Sistema Zacatòn, Mexico, and Pozzo del Merro, Italy, the deepest phreatic sinkholes in the world: Geological Society of America Abstracts with Programs 34, session 19–4:1–52.
-
Gerrard SP . 2015. The Cenotes of the Riviera Maya. Page Publishing Inc.
-
Giardini M. 2012a. Il Pozzo del Merro: aspetti botanici. In: Giardini M , editor, Sant’Angelo Romano (Monti Cornicolani, Roma). Un territorio ricco di storia e di natura. Comune di Sant’Angelo Romano, Regione Lazio – Assessorato Ambiente e Sviluppo sostenibile, Grafica Ripoli, Tivoli, pp. 286–293.
-
Giardini M. (ed.). 2012b. Sant’Angelo Romano (Monti Cornicolani, Roma). Un territorio ricco di storia e di natura. Comune di Sant’Angelo Romano, Regione Lazio – Assessorato Ambiente e Sviluppo sostenibile, Grafica Ripoli, Tivoli.
-
Giardini M , Caramanna G . 2012. Il Pozzo del Merro: storia delle ricerche e situazione attuale. In: Gardini M , editor, Sant’Angelo Romano (Monti Cornicolani, Roma). Un territorio ricco di storia e di natura, Comune di Sant’Angelo Romano, Regione Lazio – Assessorato Ambiente e Sviluppo sostenibile, Grafica Ripoli, Tivoli, pp. 265–273.
-
Giardini M , Caramanna G , Calamita U . 2001. L’imponente sinkhole del Pozzo del Merro (Monti Cornicolani, Roma): stato attuale delle conoscenze. Natura e Montagna. 48:12–27.
-
Guthery FS . 2007. Deductive and inductive methods of accumulating reliable knowledge in wildlife science. J Wild Manag. 71:222–225.
-
Hamilton-Smith E. 2001. Current initiatives in the protection of karst biodiversity. Natura Croat. 10:229–242.
-
Hermansen JS , Sæther SA , Elgvin TO , Borge T , Hjelle E , Sætre G-P . 2011. Hybrid speciation in sparrows I: phenotypic intermediacy, genetic admixture and barriers to gene flow. Molec Ecol. 20:3812–3822.
-
Hicks LE . 1938. A Unique Population of Water Birds in Northern Ohio: 1937. Wilson Bull. 50:197–200.
-
Hinsley SA , Bellamy PE , Newton I , Sparks TH . 1995. Habitat and landscape factors influencing the presence of individual breeding bird species in woodland fragments. J Avian Biol. 26:94–104.
-
Hutchinson JMC . 1999. Factors influencing the surface fauna of inland blue holes on South Andros, Bahamas. Bahamas J Sc. 6:29–43.
-
Keiller BM . 2011. The impact of sinkholes on species richness and diversity: implications for mine rehabilitation. Doctoral dissertation. Available on: wiredspace.wits.ac.za/bitstream/handle/10539/9103/BKeiller_0420141A.pdf.
-
Klaas EE . 2011. Summer Birds from the Yucatan Peninsula. Project Gutenberg.
-
Koleff P , Gaston KJ , Lennon JJ . 2003. Measuring beta diversity for presence–absence data. J Anim Ecol. 72:367–382.
-
Kroodsma DE , Byers BE . 1991. The function(s) of bird song. Am Zool. 31:318–328.
-
Iannilli V , Vigna Taglianti A . 2005. New data of the genus Niphargus (Amphipoda, Niphargidae) in Italy, with description of a new species of the orcinus group. Crustaceana 77:1253–1261.
-
James FC , Shugart HH . 1970. A quantitative method of habitat description. Audubon Field Not. 24:727–736.
-
Jones WK , Hobbs III HH , Wicks CM , Currle RR , Hose LD , Kerbo RC , Goodbar JR , Trout J . 2003. Recommendations and guidelines for managing caves on protected lands. Karst Waters Institute, special publication 8. Charles Town.
-
Lewin J , Woodward JC . 2007. Karst geomorphology and environmental change. In: Woodward J , editor, The Physical Geography of the Mediterranean. Oxford: Oxford University Press, pp. 287–317.
-
Li C , Xiong K , Wu G . 2013a. Process of biodiversity research of Karst areas in China. Acta Ecol Sinica. 33:192–200.
-
Li Z , Lu Z , Shu X , Jiang G , Xu L , Zhou F . 2013b. Nestedness of bird assemblages in the karst forest fragments of southwestern Guangxi, China. Chinese Birds 4:170–183.
-
Lloyd M , Ghelardi RJ . 1964. A table for calculating the equitability component of species diversity. J Anim Ecol. 33:217–225.
-
Lorenzetti E , Battisti C . 2007. Nature reserve selection on forest fragments in a suburban landscape (Rome, Central Italy): indications from a set of avian species. Landsc Res. 32:57–78.
-
Magurran A. 2004. Measuring Biological Diversity. London: Blackwell.
-
Magurran A , McGill BJ . 2011. Biological diversity. Frontiers in measurements and assessments. Oxford, Oxford University Press.
-
Møller AP . 1987. Breeding birds in habitat patches: random distribution of species and individuals? J Biogeogr 14:225–236.
-
Opdam P , Rijsdijk G , Hustings F . 1985. Bird communities in small woods in an agricultural landscape: effects of area and isolation. Biol Conserv. 34:333–352.
-
Orłowski G , Martini K , Martini M . 2008. Avian responses to undergrowth removal in a suburban wood. Polish J Ecol. 56:487–495.
-
Özkan K , Gulsoy S , Mert A , Ozturk M , Muys B . 2010. Plant distribution-altitude and landform relationships in karstic sinkholes of Mediterranean region of Turkey. J Environm Biol. 31:51–60.
-
Palozzi R , Caramanna G , Albertano P , Congestri R , Bruno L , Romano R , Giganti MG , Zenobi R , Costanzo C , Valente G , Polani D , Vecchio M , Vinci M , Sbordoni V . 2010. The underwater exploration of the Merro sinkhole and the associated diving physiological and psychological effects. Underwater Techn. 29:125–134.
-
Polli E. 2005. Aspetti speleo-vegetazionali della “Jama Dimnice”, 736 S (“Grotta del Fumo”, 626 VG) nel Matarsko Podolje (Valsecca di Castelnuovo) di Markošc�ina (Carso sloveno). Contributo alla conoscenza della speleoflora vascolare carsica. Atti Mem Comm Grotte “E. Boegan”. 40:63–83.
-
Reynolds JD . 2014. Preliminary notes on three turloughs (temporary ponds overlying karst) in County Limerick, with comments on their vegetation and water beetle fauna. Biology and Environment, Proceed Royal Irish Acad. 114.
-
Rimmer CC , Townsend JM , Townsend AK , Fernández EM , Almonte J . 2005. Avian Diversity, Abundance, And Conservation Status In The Macaya Biosphere Reserve of Haiti. Ornitol Neotrop. 16:219–230.
-
Roble SM , Stevenson DJ . 1998. Records of Odonata, Fish, and Birds from the Grafton Ponds Sinkhole Complex, York County, Virginia. Banisteria. 12:3–17.
-
Romano A , Salvidio S , Palozzi R , Sbordoni V . 2012. Diet of the newt, Triturus carnifex (Laurenti, 1768), in the flooded karst sinkhole Pozzo del Merro, central Italy. J Cave Karst St. 74:271–277.
-
Romesburg HC . 1981. Wildlife science: gaining reliable knowledge. J Wildl Manag. 45:293–313.
-
Rodriguéz-Gironés MA , Santamarìa L . 2006. A new algorithm to calculate the nestedness temperature of presence-absence matrices. J Biogeogr. 33:924–935.
-
Sauro U. 1993. Human impact on the karst of the Venetian Fore-Alps, Italy. Environm Geol. 21:115–121.
-
Schmitter-Soto JJ , Comìn FA , Escobar-Briones E , Herrera-Silveira J , Alcocer J , Suarez- Morales E , Elìas-Gutierrez M , Dìaz-Arce V , Marìn LE , Steinich B . 2002. Hydrogeochemical and biological characteristics of cenotes in the Yucatan Peninsula (SE Mexico). Hydrobiologia. 467:215–228.
-
Shannon CE , Weaver W . 1963. Mathematical theory of communication. Urbana, Illinois: University of Illinois Press.
-
Sorjonen J. 1986. Factors affecting the structure of song and the singing behaviour of some northern European passerine birds. Behaviour. 98:286–304.
-
SPSS Inc. 2003. SPSS for Windows – Release 13.0 (1 Sep 2004), Leadtools (c), Lead Technologies Inc.
-
Strona G , Nappo D , Boccacci F , Fattorini S , San-Miguel-Ayanz J . 2014. A fast and unbiased procedure to randomize ecological binary matrices with fixed rows and column totals. Nature comm. 5:4114.
-
Sutherland W. 2006. Ecological Census Techniques. Cambridge: Cambridge University Press.
-
Tews J , Brose U , Grimm V , Tielbörger K , Wichmann MC , Schwager M , Jeltsch F . 2004. Animal species diversity driven by habitat heterogeneity/diversity: the importance of keystone structures. J Biogeogr. 31:79–92.
-
Tomiaojæ L , Bursell J . 2006. Why dark plumage of the European Blackbirds Turdus merula? Lundiana. 7:127–132.
-
Toms JD , Schmiegelow FK , Hannon SJ , Villard M-A . 2006. Are point counts of boreal songbirds reliable proxies for more intensive abundance estimators? Auk. 123:438–454.
-
Ulrich W , Gotelli NJ . 2007. Null model analysis of species nestedness patterns. Ecology. 88:1824–1831.
-
Urich PB , Day M , Lynagh F . 2001. Policy and practice in karst landscape protection: Bohol, the Philippines. Geograph J. 67:305–323.
-
Van Beynen P , Townsend K . 2005. A disturbance index for karst environments. Environm Manag. 36:101–116.
-
Vilisics F , Sòlymos P , Nagy A , Farkas R , Kemencei Z , Hornung E . 2011. Small scale gradient effects on isopods (Crustacea: Oniscidea) in karstic sinkhole. Biologia. 66:499–505.
-
Vrbek M , Fiedler S . 2000. The ecological and floristic characteristics of Ledena jama pit on Velebit mountain, Croatia. Natura Croat. 9:115–131.
-
Watson J , Hamilton-Smith E , Gillieson D , Kiernan K . 1997. Guidelines for Cave and Karst protection. IUCN, Gland, Switzerland.
-
Whittaker RH . 1965. Dominance and diversity in land plant communities. Science. 147:250–260.
-
Whittow J. 1984. Dictionary of Physical Geography. London: Penguin.
-
Wiens JA . 1989. The Ecology of Bird Communities, Vols. 1 and 2. Cambridge Studies in Ecology, Cambridge: Cambridge University Press.
-
Zangari L , Ferraguti M , Battisti C , Luiselli L , Bologna MA . 2013. Breeding birds along a vegetation gradient in a Mediterranean landscape: contrasting patterns in spatial diversity. Vie Milieu. 63:121–126.
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Diversity metrics, species turnovers and nestedness of bird assemblages in a deep karst sinkhole
In: Israel Journal of Ecology and EvolutionServizio Aree protette, Città Metropolitana di Roma Capitale, via Tiburtina, 691, 00159 Rome, Italy;
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We reported a study on breeding birds occurring inside an 80 m-deep karst sinkhole, with the characterization of the assemblages recorded along its semi-vertical slopes from the upper edge until the bottom. The internal sides of the sinkhole have been vertically subdivided in four belts about 20 m high. The highest belt (at the upper edge of the cenote) showed the highest values in mean number of bird detections, mean and normalized species richness, and Shannon diversity index. The averaged values of number of detections and species richness significantly differ among belts. Species turnover (Cody’s β-diversity) was maximum between the highest belts. Whittaker plots showed a marked difference among assemblages shaping from broken-stick model to geometric series, and explicited a spatial progressive stress with a disruption in evenness towards the deepest belts. Bird assemblages evidenced a nested subset structure with deeper belts containing successive subsets of the species occurring in the upper belts. We hypothesize that, at least during the daytime in breeding season, the observed non-random distribution of species along the vertical stratification is likely due to (i) the progressive simplification both of the floristic composition and vegetation structure, and (ii) the paucity of sunlight as resources from the upper edge to the inner side of the cenote.
| All Time | Past 365 days | Past 30 Days | |
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| Abstract Views | 500 | 94 | 16 |
| Full Text Views | 29 | 0 | 0 |
| PDF Views & Downloads | 18 | 0 | 0 |
