Fukuda, S., Toh, H., Hase, K., Oshima, K., Nakanishi, Y., Yoshimura, K., Tobe, T., Clarke, J.M., Topping, D.L., Suzuki, T., Taylor, T.D., Itoh, K., Kikuchi, J., Morita, H., Hattori, M. and Ohno, H., 2011. Bifidobacteria can protect from enteropathogenic infection through production of acetate. Nature 469: 543-547.

'Bifidobacteria can protect from enteropathogenic infection through production of acetate ' () 469 Nature : 543 -547.

Bifidobacteria can protect from enteropathogenic infection through production of acetateNature469543547)| false
• Search Google Scholar

Hamer, H.M., De Preter, V., Windey, K. and Verbeke, K., 2012. Functional analysis of colonic bacterial metabolism: relevant to health? American Journal of Physiology – Gastrointestinal and Liver Physiology 302: G1-G9.

'Functional analysis of colonic bacterial metabolism: relevant to health? ' () 302 American Journal of Physiology – Gastrointestinal and Liver Physiology : G1 -G9.

Functional analysis of colonic bacterial metabolism: relevant to health?American Journal of Physiology – Gastrointestinal and Liver Physiology302G1G9)| false
• Search Google Scholar

Hougee, S., Vriesema, A.J., Wijering, S.C., Knippels, L.M., Folkerts, G., Nijkamp, F.P., Knol, J. and Garssen, J., 2010. Oral treatment with probiotics reduces allergic symptoms in ovalbumin-sensitized mice: a bacterial strain comparative study. International Archives of Allergy and Immunology 151: 107-117.

'Oral treatment with probiotics reduces allergic symptoms in ovalbumin-sensitized mice: a bacterial strain comparative study ' () 151 International Archives of Allergy and Immunology : 107 -117.

Oral treatment with probiotics reduces allergic symptoms in ovalbumin-sensitized mice: a bacterial strain comparative studyInternational Archives of Allergy and Immunology151107117)| false
• Search Google Scholar

Inoue, Y., Iwabuchi, N., Xiao, J.-Z., Yaeshima, T. and Iwatsuki, K., 2009. Suppressive effects of Bifidobacterium breve strain M-16V on T-helper type 2 immune responses in a murine model. Biological and Pharmaceutical Bulletin 32: 760-763.

'Suppressive effects of Bifidobacterium breve strain M-16V on T-helper type 2 immune responses in a murine model ' () 32 Biological and Pharmaceutical Bulletin : 760 -763.

Suppressive effects of Bifidobacterium breve strain M-16V on T-helper type 2 immune responses in a murine modelBiological and Pharmaceutical Bulletin32760763)| false
• Search Google Scholar

Inoue, Y., Kambara, T., Murata, N., Komori-Yamaguchi, J., Matsukura, S., Takahashi, Y., Ikezawa, Z. and Aihara, M., 2014. Effects of oral administration of lactobacillus acidophilus L-92 on the symptoms and serum cytokines of atopic dermatitis in Japanese adults: a double-blind, randomized, clinical trial. International Archives of Allergy and Immunology 165: 247-254.

'Effects of oral administration of lactobacillus acidophilus L-92 on the symptoms and serum cytokines of atopic dermatitis in Japanese adults: a double-blind, randomized, clinical trial ' () 165 International Archives of Allergy and Immunology : 247 -254.

Effects of oral administration of lactobacillus acidophilus L-92 on the symptoms and serum cytokines of atopic dermatitis in Japanese adults: a double-blind, randomized, clinical trialInternational Archives of Allergy and Immunology165247254)| false
• Search Google Scholar

Izumi, H., Minegishi, M., Sato, Y., Shimizu, T., Sekine, K. and Takase, M., 2015. Bifidobacterium breve alters immune function and ameliorates DSS-induced inflammation in weanling rats. Pediatric Research 78: 407-416.

'Bifidobacterium breve alters immune function and ameliorates DSS-induced inflammation in weanling rats ' () 78 Pediatric Research : 407 -416.

Bifidobacterium breve alters immune function and ameliorates DSS-induced inflammation in weanling ratsPediatric Research78407416)| false
• Search Google Scholar

Jorjão, A.L., De Oliveira, F.E., Leão, M.V., Carvalho, C.A., Jorge, A.O. and De Oliveira, L.D., 2015. Live and heat-killed Lactobacillus rhamnosus ATCC 7469 may induce modulatory cytokines profiles on macrophages RAW 264.7. Scientific World Journal 2015: 716749.

'Live and heat-killed Lactobacillus rhamnosus ATCC 7469 may induce modulatory cytokines profiles on macrophages RAW 264 ', in Scientific World Journal , ().

Live and heat-killed Lactobacillus rhamnosus ATCC 7469 may induce modulatory cytokines profiles on macrophages RAW 264Scientific World Journal)| false
• Search Google Scholar

Kanehisa, M. and Goto, S., 2000. KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Research 28: 27-30.

'KEGG: Kyoto encyclopedia of genes and genomes ' () 28 Nucleic Acids Research : 27 -30.

KEGG: Kyoto encyclopedia of genes and genomesNucleic Acids Research282730)| false
• Search Google Scholar

Kivit, S., Saeland, E., Kraneveld, A.D., Kant, H.J.G., Schouten, B., Esch, B.C.A.M., Knol, J., Sprikkelman, A.B., Aa, L.B., Knippels, L.M.J., Garssen, J., Kooyk, Y. and Willemsen, L.E.M., 2012. Galectin-9 induced by dietary synbiotics is involved in suppression of allergic symptoms in mice and humans. Allergy 67: 343-352.

'Galectin-9 induced by dietary synbiotics is involved in suppression of allergic symptoms in mice and humans ' () 67 Allergy : 343 -352.

Galectin-9 induced by dietary synbiotics is involved in suppression of allergic symptoms in mice and humansAllergy67343352)| false
• Search Google Scholar

Li, J., Lee, D.S. and Madrenas, J., 2013. Evolving bacterial envelopes and plasticity of TLR2-dependent responses: basic research and translational opportunities. Frontiers in Immunology 4: 347.

'Evolving bacterial envelopes and plasticity of TLR2-dependent responses: basic research and translational opportunities ' () 4 Frontiers in Immunology : 347.

Evolving bacterial envelopes and plasticity of TLR2-dependent responses: basic research and translational opportunitiesFrontiers in Immunology4347)| false
• Search Google Scholar

Li, Y., Shimizu, T., Hosaka, A., Kaneko, N., Ohtsuka, Y. and Yamashiro, Y., 2004. Effects of Bifidobacterium breve supplementation on intestinal flora of low birth weight infants. Pediatrics International 46: 509-515.

'Effects of Bifidobacterium breve supplementation on intestinal flora of low birth weight infants ' () 46 Pediatrics International : 509 -515.

Effects of Bifidobacterium breve supplementation on intestinal flora of low birth weight infantsPediatrics International46509515)| false
• Search Google Scholar

Maruyama, M., Abe, R., Shimono, T., Iwabuchi, N., Abe, F. and Xiao, J.-Z., 2016. The effects of non-viable Lactobacillus on immune function in the elderly: a randomised, double-blind, placebo-controlled study. International Journal of Food Sciences and Nutrition 67: 67-73.

'The effects of non-viable Lactobacillus on immune function in the elderly: a randomised, double-blind, placebo-controlled study ' () 67 International Journal of Food Sciences and Nutrition : 67 -73.

The effects of non-viable Lactobacillus on immune function in the elderly: a randomised, double-blind, placebo-controlled studyInternational Journal of Food Sciences and Nutrition676773)| false
• Search Google Scholar

Matsumoto, M., Kibe, R., Ooga, T., Aiba, Y., Kurihara, S., Sawaki, E., Koga, Y. and Benno, Y., 2012. Impact of intestinal microbiota on intestinal luminal metabolome. Scientific Reports 2: 233.

'Impact of intestinal microbiota on intestinal luminal metabolome ' () 2 Scientific Reports : 233.

Impact of intestinal microbiota on intestinal luminal metabolomeScientific Reports2233)| false
• Search Google Scholar

Ménard, O., Butel, M.-J., Gaboriau-Routhiau, V. and Waligora-Dupriet, A.-J., 2008. Gnotobiotic mouse immune response induced by Bifidobacterium sp. strains isolated from infants. Applied and Environmental Microbiology 74: 660-666.

'Gnotobiotic mouse immune response induced by Bifidobacterium sp ' () 74 Applied and Environmental Microbiology : 660 -666.

Gnotobiotic mouse immune response induced by Bifidobacterium spApplied and Environmental Microbiology74660666)| false
• Search Google Scholar

Ohashi, Y., Hirayama, A., Ishikawa, T., Nakamura, S., Shimizu, K., Ueno, Y., Tomita, M. and Soga, T., 2008. Depiction of metabolome changes in histidine-starved Escherichia coli by CE-TOFMS. Molecular Biosystems 4: 135-147.

'Depiction of metabolome changes in histidine-starved Escherichia coli by CE-TOFMS ' () 4 Molecular Biosystems : 135 -147.

Depiction of metabolome changes in histidine-starved Escherichia coli by CE-TOFMSMolecular Biosystems4135147)| false
• Search Google Scholar

Ooga, T., Sato, H., Nagashima, A., Sasaki, K., Tomita, M., Soga, T. and Ohashi, Y., 2011. Metabolomic anatomy of an animal model revealing homeostatic imbalances in dyslipidaemia. Molecular Biosystems 7: 1217-1223.

'Metabolomic anatomy of an animal model revealing homeostatic imbalances in dyslipidaemia ' () 7 Molecular Biosystems : 1217 -1223.

Metabolomic anatomy of an animal model revealing homeostatic imbalances in dyslipidaemiaMolecular Biosystems712171223)| false
• Search Google Scholar

Patole, S., Keil, A.D., Chang, A., Nathan, E., Doherty, D., Simmer, K., Esvaran, M. and Conway, P., 2014. Effect of Bifidobacterium breve M-16V supplementation on fecal bifidobacteria in preterm neonates – a randomised double blind placebo controlled trial. PLoS ONE 9: e89511.

'Effect of Bifidobacterium breve M-16V supplementation on fecal bifidobacteria in preterm neonates – a randomised double blind placebo controlled trial ' () 9 PLoS ONE : e89511.

Effect of Bifidobacterium breve M-16V supplementation on fecal bifidobacteria in preterm neonates – a randomised double blind placebo controlled trialPLoS ONE9e89511)| false
• Search Google Scholar

Pfalzer, A.C., Choi, S.-W., Tammen, S.A., Park, L.K., Bottiglieri, T., Parnell, L.D. and Lamon-Fava, S., 2014. S-adenosylmethionine mediates inhibition of inflammatory response and changes in DNA methylation in human macrophages. Physiological Genomics 46: 617-623.

'S-adenosylmethionine mediates inhibition of inflammatory response and changes in DNA methylation in human macrophages ' () 46 Physiological Genomics : 617 -623.

S-adenosylmethionine mediates inhibition of inflammatory response and changes in DNA methylation in human macrophagesPhysiological Genomics46617623)| false
• Search Google Scholar

Sanders, M.E., Guarner, F., Guerrant, R., Holt, P.R., Quigley, E.M., Sartor, R.B., Sherman, P.M. and Mayer, E.A., 2013. An update on the use and investigation of probiotics in health and disease. Gut 62: 787-796.

'An update on the use and investigation of probiotics in health and disease ' () 62 Gut : 787 -796.

An update on the use and investigation of probiotics in health and diseaseGut62787796)| false
• Search Google Scholar

Sang, L.-X., Chang, B., Dai, C., Gao, N., Liu, W.-X. and Jiang, M., 2014. Heat-killed VSL#3 Ameliorates dextran sulfate sodium (DSS)-induced acute experimental colitis in rats. International Journal of Molecular Sciences 15: 15-28.

'Heat-killed VSL#3 Ameliorates dextran sulfate sodium (DSS)-induced acute experimental colitis in rats ' () 15 International Journal of Molecular Sciences : 15 -28.

Heat-killed VSL#3 Ameliorates dextran sulfate sodium (DSS)-induced acute experimental colitis in ratsInternational Journal of Molecular Sciences151528)| false
• Search Google Scholar

Satoh, T., Izumi, H., Iwabuchi, N., Odamaki, T., Namba, K., Abe, F. and Xiao, J.Z., 2015. Bifidobacterium breve prevents necrotising enterocolitis by suppressing inflammatory responses in a preterm rat model. Beneficial Microbes 7: 75-82.

'Bifidobacterium breve prevents necrotising enterocolitis by suppressing inflammatory responses in a preterm rat model ' () 7 Beneficial Microbes : 75 -82.

Bifidobacterium breve prevents necrotising enterocolitis by suppressing inflammatory responses in a preterm rat modelBeneficial Microbes77582)| false
• Search Google Scholar

Sugahara, H., Odamaki, T., Fukuda, S., Kato, T., Xiao, J.-Z., Abe, F., Kikuchi, J. and Ohno, H., 2015b. Probiotic Bifidobacterium longum alters gut luminal metabolism through modification of the gut microbial community. Scientific Reports 5: 13548.

'Probiotic Bifidobacterium longum alters gut luminal metabolism through modification of the gut microbial community ' () 5 Scientific Reports : 13548.

Probiotic Bifidobacterium longum alters gut luminal metabolism through modification of the gut microbial communityScientific Reports513548)| false
• Search Google Scholar

Sugahara, H., Odamaki, T., Hashikura, N., Abe, F. and Xiao, J.-Z., 2015a. Differences in folate production by bifidobacteria of different origins. Bioscience of Microbiota, Food and Health 34: 87-93.

'Differences in folate production by bifidobacteria of different origins ' () 34 Bioscience of Microbiota, Food and Health : 87 -93.

Differences in folate production by bifidobacteria of different originsBioscience of Microbiota, Food and Health348793)| false
• Search Google Scholar

Sugawara, T., Sawada, D., Ishida, Y., Aihara, K., Aoki, Y., Takehara, I., Takano, K. and Fujiwara, S., 2016. Regulatory effect of paraprobiotic Lactobacillus gasseri CP2305 on gut environment and function. Microbial Ecology in Health and Disease 27: 30259.

'Regulatory effect of paraprobiotic Lactobacillus gasseri CP2305 on gut environment and function ' () 27 Microbial Ecology in Health and Disease : 30259.

Regulatory effect of paraprobiotic Lactobacillus gasseri CP2305 on gut environment and functionMicrobial Ecology in Health and Disease2730259)| false
• Search Google Scholar

Sugimoto, M., Wong, D.T., Hirayama, A., Soga, T. and Tomita, M., 2010. Capillary electrophoresis mass spectrometry-based saliva metabolomics identified oral, breast and pancreatic cancer-specific profiles. Metabolomics 6: 78-95.

'Capillary electrophoresis mass spectrometry-based saliva metabolomics identified oral, breast and pancreatic cancer-specific profiles ' () 6 Metabolomics : 78 -95.

Capillary electrophoresis mass spectrometry-based saliva metabolomics identified oral, breast and pancreatic cancer-specific profilesMetabolomics67895)| false
• Search Google Scholar

Sun, J., Nishiyama, T., Shimizu, K. and Kadota, K., 2013. TCC: an R package for comparing tag count data with robust normalization strategies. BMC Bioinformatics 14: 219.

'TCC: an R package for comparing tag count data with robust normalization strategies ' () 14 BMC Bioinformatics : 219.

TCC: an R package for comparing tag count data with robust normalization strategiesBMC Bioinformatics14219)| false
• Search Google Scholar

Ting, W.-J., Kuo, W.-W., Hsieh, D.J., Yeh, Y.-L., Day, C.-H., Chen, Y.-H., Chen, R.-J., Padma, V.V., Chen, Y.-H. and Huang, C.-Y., 2015. Heat killed Lactobacillus reuteri GMNL-263 reduces fibrosis effects on the liver and heart in high fat diet-hamsters via TGF-β suppression. International Journal of Molecular Sciences 16: 25881-25896.

'Heat killed Lactobacillus reuteri GMNL-263 reduces fibrosis effects on the liver and heart in high fat diet-hamsters via TGF-β suppression ' () 16 International Journal of Molecular Sciences : 25881 -25896.

Heat killed Lactobacillus reuteri GMNL-263 reduces fibrosis effects on the liver and heart in high fat diet-hamsters via TGF-β suppressionInternational Journal of Molecular Sciences162588125896)| false
• Search Google Scholar

Tomosada, Y., Villena, J., Murata, K., Chiba, E., Shimazu, T., Aso, H., Iwabuchi, N., Xiao, J.Z., Saito, T. and Kitazawa, H., 2013. Immunoregulatory effect of bifidobacteria strains in porcine intestinal epithelial cells through modulation of ubiquitin-editing enzyme A20 expression. PLoS ONE 8: e59259.

'Immunoregulatory effect of bifidobacteria strains in porcine intestinal epithelial cells through modulation of ubiquitin-editing enzyme A20 expression ' () 8 PLoS ONE : e59259.

Immunoregulatory effect of bifidobacteria strains in porcine intestinal epithelial cells through modulation of ubiquitin-editing enzyme A20 expressionPLoS ONE8e59259)| false
• Search Google Scholar

Vintiñi, E.O. and Medina, M.S., 2011. Host immunity in the protective response to nasal immunization with a pneumococcal antigen associated to live and heat-killed Lactobacillus casei. BMC Immunology 12: 46.

'Host immunity in the protective response to nasal immunization with a pneumococcal antigen associated to live and heat-killed Lactobacillus casei ' () 12 BMC Immunology : 46.

Host immunity in the protective response to nasal immunization with a pneumococcal antigen associated to live and heat-killed Lactobacillus caseiBMC Immunology1246)| false
• Search Google Scholar

Xia, J., Sinelnikov, I.V., Han, B. and Wishart, D.S., 2015. MetaboAnalyst 3.0 – making metabolomics more meaningful. Nucleic Acids Research 43: W251-W257.

'MetaboAnalyst 3.0 – making metabolomics more meaningful ' () 43 Nucleic Acids Research : W251 -W257.

MetaboAnalyst 3.0 – making metabolomics more meaningfulNucleic Acids Research43W251W257)| false
• Search Google Scholar